PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02211
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 270aa    MW: 30416.6 Da    PI: 4.4439
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02211genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.8e-171262155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta  Aa  +++a+++++g
  PEQU_02211 12 CSYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGTFPTALNAAIVYDQAARAMYG 62
                67*****999.**********8...2.359***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.4E-111262IPR001471AP2/ERF domain
CDDcd000185.67E-281270No hitNo description
SuperFamilySSF541714.25E-191370IPR016177DNA-binding domain
PROSITE profilePS5103220.9431370IPR001471AP2/ERF domain
SMARTSM003802.9E-311376IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-291370IPR001471AP2/ERF domain
PRINTSPR003672.3E-81425IPR001471AP2/ERF domain
PRINTSPR003672.3E-83652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MRGKGGPDNS KCSYRGVRQR TWGKWVAEIR EPNRGNRLWL GTFPTALNAA IVYDQAARAM  60
YGPSACLNLP GDQFTSLNEP RTTNSESYGS ITTTTHCSNV SEDLTESSTV KKMQNGVSLN  120
VDEKKELALD SPHAETSFLR TALKEETEEE EEANVQSIDW QDISLENFDV DEMLRMMDTD  180
LNNTEVSRQR EKDASQHCSS RWHMESPSAL SFQLQNPDAK MLGSLTHMDM GINDTDFCHE  240
FIRPMRQGFD YVPVGDPELF SLGFNDGEPI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-171470360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP95752939
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.14e-36ERF family protein